AT3G60490


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G60490
Cluster HCCA cluster: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.07 Gene family
GSVIVT01028315001 No alias No description available 0.03 Gene family
Smo409196 PACid_15422590 No description available 0.02 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Solyc12g056590.2.1 Solyc12g056590.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d008872 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.02 Gene family
Zm00001d024436 GRMZM2G055070 No description available 0.03 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.03 Gene family
Zm00001d039019 GRMZM2G317596 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 70 119
No external refs found!