AT3G60220 (ATL4, TL4)


Aliases : ATL4, TL4

Description : TOXICOS EN LEVADURA 4


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G60220

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.07 Gene family
AT1G72200 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G03550 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.06 Gene family
AT5G47610 No alias RING/U-box superfamily protein 0.02 Gene family
GSVIVT01009096001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
GSVIVT01022306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01027769001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g15100 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_1115518g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_222729g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Smo121181 PACid_15415477 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc01g100095.1.1 Solyc01g100095.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc01g100100.3.1 Solyc01g100100.3 No description available 0.03 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d000390 GRMZM2G312078 No description available 0.01 Gene family
Zm00001d029763 GRMZM2G083382 No description available 0.01 Gene family
Zm00001d047068 GRMZM2G368765 No description available 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0016567 protein ubiquitination IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 116 159
No external refs found!