AT1G19000

Description : Homeodomain-like superfamily protein

Gene families : OG_01_0000067 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000067_tree ,
OG_02_0000426 (LandPlants) Phylogenetic Tree(s): OG_02_0000426_tree ,
OG_03_0000467 (SeedPlants) Phylogenetic Tree(s): OG_03_0000467_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G19000
Cluster	HCCA: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
AT3G11280	No alias	Duplicated homeodomain-like superfamily protein	0.04	Archaeplastida
GSVIVT01015223001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01016996001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01020132001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
Gb_05002	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
LOC_Os01g09640.1	No alias	transcription factor (MYB-related)	0.02	Archaeplastida
LOC_Os05g10690.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
MA_9437011g0010	No alias	transcription factor (MYB-related)	0.04	Archaeplastida
Pp3c4_17230V3.1	No alias	Duplicated homeodomain-like superfamily protein	0.03	Archaeplastida
Smo84280	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
Solyc02g082390.1.1	No alias	transcription factor (MYB-related)	0.04	Archaeplastida
Solyc03g096350.3.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Solyc04g005100.3.1	No alias	transcription factor (MYB-related)	0.04	Archaeplastida
Solyc07g026680.2.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Zm00001e002313_P001	No alias	transcription factor (MYB-related)	0.04	Archaeplastida
Zm00001e019254_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Zm00001e027835_P005	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Zm00001e037865_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
GSVIVT01020132001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	LandPlants
LOC_Os01g09640.1	No alias	transcription factor (MYB-related)	0.02	LandPlants
LOC_Os05g10690.1	No alias	transcription factor (MYB-related)	0.03	LandPlants
LOC_Os10g41260.1	No alias	transcription factor (MYB-related)	0.02	LandPlants
Smo130556	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	LandPlants
Solyc04g005100.3.1	No alias	transcription factor (MYB-related)	0.04	LandPlants
Zm00001e002313_P001	No alias	transcription factor (MYB-related)	0.03	LandPlants
Zm00001e025946_P002	No alias	transcription factor (MYB-related)	0.02	LandPlants
GSVIVT01020132001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	SeedPlants
LOC_Os01g09640.1	No alias	transcription factor (MYB-related)	0.02	SeedPlants
Zm00001e002313_P001	No alias	transcription factor (MYB-related)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	103	147

External Links

No external refs found!

AT1G19000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation