- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : VTC2
Description : GDP-L-galactose phosphorylase *(VTC2/5) & original description: none
Gene families : OG0002288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002288_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g24483 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G26850 | VTC2 | mannose-1-phosphate guanylyltransferase... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g064538 | VTC2 | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0157.g053833 | VTC2 | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07594 | VTC2 | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g08810.1 | VTC5, LOC_Os12g08810 | GDP-L-galactose phosphorylase (VTC2/5) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04764 | VTC2 | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.04 | OrthoFinder output from all 47 species | |
| MA_162630g0010 | VTC2 | GDP-L-galactose phosphorylase (VTC2/5) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g07760.1 | VTC2 | GDP-L-galactose phosphorylase (VTC2/5) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15138 | VTC2 | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g16667 | VTC2 | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g26126 | No alias | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Smo99090 | VTC2 | Redox homeostasis.low-molecular-weight... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g073320.3.1 | VTC2, Solyc06g073320 | GDP-L-galactose phosphorylase (VTC2/5) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02718 | VTC2 | GDP-L-galactose phosphorylase *(VTC2/5) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029452_P001 | VTC5, Zm00001e029452 | GDP-L-galactose phosphorylase (VTC2/5) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |