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  5. Nbi_g24455

Nbi_g24455


Description : not classified & original description: none


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24455
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT5G22310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g17876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G019400.1 Ceric.24G019400 not classified & original description: pacid=50628467... 0.05 OrthoFinder output from all 47 species
Ceric.28G022900.1 Ceric.28G022900 not classified & original description: pacid=50569894... 0.04 OrthoFinder output from all 47 species
LOC_Os06g31190.1 LOC_Os06g31190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g12255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!