Nbi_g24444 (ATCIMS, ATMS1, ATMETS)

Aliases : ATCIMS, ATMS1, ATMETS

Description : EC_2.1 transferase transferring one-carbon group & original description: none

Gene families : OG0000901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000901_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g24444

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00117110	ATCIMS, ATMS1,...	Amino acid metabolism.biosynthesis.aspartate...	0.05	OrthoFinder output from all 47 species
AT3G03780	MS2, ATMS2	methionine synthase 2	0.1	OrthoFinder output from all 47 species
AT5G17920	ATCIMS, ATMS1, ATMETS	Cobalamin-independent synthase family protein	0.11	OrthoFinder output from all 47 species
Als_g25137	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Als_g39723	MS2, ATMS2	methyl-tetrahydrofolate-dependent methionine synthase &...	0.06	OrthoFinder output from all 47 species
Aop_g07584	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.08	OrthoFinder output from all 47 species
Aop_g31283	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.12	OrthoFinder output from all 47 species
Aspi01Gene10415.t1	ATCIMS, ATMS1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0027.g023508	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Ceric.14G083200.1	ATCIMS, ATMS1,...	EC_2.1 transferase transferring one-carbon group &...	0.09	OrthoFinder output from all 47 species
Cre03.g180750	ATCIMS, ATMS1, ATMETS	Amino acid metabolism.biosynthesis.aspartate...	0.08	OrthoFinder output from all 47 species
Dac_g06622	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Dac_g11774	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
Dac_g21137	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Dac_g39791	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
Dcu_g14356	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.1	OrthoFinder output from all 47 species
Dcu_g20010	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Ehy_g08038	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g09199	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
GSVIVT01029971001	ATCIMS, ATMS1, ATMETS	Amino acid metabolism.biosynthesis.aspartate...	0.06	OrthoFinder output from all 47 species
GSVIVT01037511001	ATCIMS, ATMS1, ATMETS	Amino acid metabolism.biosynthesis.aspartate...	0.05	OrthoFinder output from all 47 species
Gb_23743	MS2, ATMS2	methyl-tetrahydrofolate-dependent methionine synthase	0.04	OrthoFinder output from all 47 species
LOC_Os12g42876.1	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.1	OrthoFinder output from all 47 species
LOC_Os12g42884.1	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.07	OrthoFinder output from all 47 species
Len_g19043	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.09	OrthoFinder output from all 47 species
Lfl_g06635	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.11	OrthoFinder output from all 47 species
MA_10090g0010	ATCIMS, ATMS1, ATMETS	methyl-tetrahydrofolate-dependent methionine synthase	0.07	OrthoFinder output from all 47 species
MA_10427606g0010	MS2, ATMS2	methyl-tetrahydrofolate-dependent methionine synthase	0.06	OrthoFinder output from all 47 species
MA_445633g0010	MS2, ATMS2	5-methyltetrahydropteroyltriglutamate--homocysteine...	0.03	OrthoFinder output from all 47 species
MA_619693g0010	MS2, ATMS2	5-methyltetrahydropteroyltriglutamate--homocysteine...	0.03	OrthoFinder output from all 47 species
MA_7864930g0010	MS2, ATMS2	5-methyltetrahydropteroyltriglutamate--homocysteine...	0.03	OrthoFinder output from all 47 species
MA_903046g0010	ATCIMS, ATMS1, ATMETS	5-methyltetrahydropteroyltriglutamate--homocysteine...	0.06	OrthoFinder output from all 47 species
Mp1g04570.1	ATCIMS, ATMS1, ATMETS	methyl-tetrahydrofolate-dependent methionine synthase	0.02	OrthoFinder output from all 47 species
Ore_g09430	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Pir_g03288	ATCIMS, ATMS1, ATMETS	methyl-tetrahydrofolate-dependent methionine synthase &...	0.03	OrthoFinder output from all 47 species
Ppi_g63576	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014644	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Smo171028	ATCIMS, ATMS1, ATMETS	Amino acid metabolism.biosynthesis.aspartate...	0.06	OrthoFinder output from all 47 species
Solyc10g081510.2.1	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.07	OrthoFinder output from all 47 species
Spa_g03147	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.19	OrthoFinder output from all 47 species
Spa_g06170	MS2, ATMS2	not classified & original description: none	0.16	OrthoFinder output from all 47 species
Spa_g14432	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.21	OrthoFinder output from all 47 species
Spa_g14699	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.17	OrthoFinder output from all 47 species
Spa_g15406	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.17	OrthoFinder output from all 47 species
Spa_g41877	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.1	OrthoFinder output from all 47 species
Spa_g41923	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Spa_g45631	MS2, ATMS2	EC_2.1 transferase transferring one-carbon group &...	0.12	OrthoFinder output from all 47 species
Spa_g55645	ATCIMS, ATMS1, ATMETS	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Tin_g18926	ATCIMS, ATMS1, ATMETS	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Zm00001e003281_P001	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.1	OrthoFinder output from all 47 species
Zm00001e005228_P001	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.08	OrthoFinder output from all 47 species
Zm00001e012368_P001	ATCIMS, ATMS1,...	methyl-tetrahydrofolate-dependent methionine synthase	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008172	S-methyltransferase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013215	Cbl-indep_Met_Synth_N	3	318
IPR002629	Met_Synth_C/arc	433	756

External Links

No external refs found!

Nbi_g24444 (ATCIMS, ATMS1, ATMETS)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation