AT3G57040 (ATRR4, ARR9)

Aliases : ATRR4, ARR9

Description : response regulator 9

Gene families : OG_01_0000108 (Gene family) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT3G57040
Cluster	HCCA cluster: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g35180	Os02g0557800	27.3.5 RNA.regulation of transcription.ARR Encodes an A-...	0.05	Gene family
LOC_Os02g58350	Os02g0830200	27.3.5 RNA.regulation of transcription.ARR Type A...	0.04	Gene family
MA_10431144g0010	No alias	27.3.5 RNA.regulation of transcription.ARR Encodes a...	0.02	Gene family
Solyc10g005030.3.1	Solyc10g005030.3	27.3.66 RNA.regulation of transcription.Psudo ARR...	0.04	Gene family
Zm00001d032381	GRMZM2G090264	27.3.5 RNA.regulation of transcription.ARR Type A...	0.02	Gene family
Zm00001d050200	GRMZM2G016145	27.3.5 RNA.regulation of transcription.ARR Type A...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	ISS	Arabidopsis.org
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Arabidopsis.org
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Arabidopsis.org
CC	GO:0005634	nucleus	ISM	Arabidopsis.org
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Arabidopsis.org
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IMP	Arabidopsis.org
BP	GO:0007623	circadian rhythm	RCA	Arabidopsis.org
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IEP	Arabidopsis.org
BP	GO:0009736	cytokinin-activated signaling pathway	IMP	Arabidopsis.org
BP	GO:0009736	cytokinin-activated signaling pathway	RCA	Arabidopsis.org
BP	GO:0009736	cytokinin-activated signaling pathway	TAS	Arabidopsis.org
BP	GO:0009740	gibberellic acid mediated signaling pathway	RCA	Arabidopsis.org
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010162	seed dormancy process	RCA	Arabidopsis.org
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	11	141

External Links

No external refs found!

AT3G57040 (ATRR4, ARR9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation