AT3G56340


Description : Ribosomal protein S26e family protein


Gene families : OG_01_0002448 (Gene family) Phylogenetic Tree(s): OG0002448_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G56340
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001486.9 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.16 Gene family
Cre16.g682300 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.22 Gene family
GSVIVT01024576001 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.12 Gene family
GSVIVT01032696001 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os01g60790 Os01g0823300 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.22 Gene family
LOC_Os05g39960 Os05g0477300 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.18 Gene family
Smo77589 PACid_15419489 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.07 Gene family
Solyc04g008810.3.1 Solyc04g008810.3 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.22 Gene family
Solyc06g007470.3.1 Solyc06g007470.3 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.15 Gene family
Zm00001d010614 GRMZM5G827266 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.2 Gene family
Zm00001d012992 GRMZM5G899149 No description available 0.22 Gene family
Zm00001d034609 GRMZM2G129015 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.23 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0009165 nucleotide biosynthetic process RCA Arabidopsis.org
BP GO:0009664 plant-type cell wall organization RCA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
BP GO:0042545 cell wall modification RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 106
No external refs found!