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  5. Nbi_g24235

Nbi_g24235 (AtTCP14, TCP14)


Aliases : AtTCP14, TCP14

Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24235
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00081210 AT-TCP20, TCP20,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT1G69690 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
AT2G45680 No alias TCP family transcription factor 0.05 OrthoFinder output from all 47 species
AT3G27010 AT-TCP20, TCP20,... TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.02 OrthoFinder output from all 47 species
Adi_g007407 AT-TCP20, TCP20,... circAdian clock activation factor *(TCP20) & original... 0.02 OrthoFinder output from all 47 species
Adi_g055980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06733 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15454 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01691 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43160.1 LOC_Os08g43160 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
MA_81710g0010 No alias transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Msp_g10117 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05851 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03168 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07074 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50317 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27632 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03941 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013125 AtTCP14, TCP14 TCP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Solyc11g020670.1.1 Solyc11g020670 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e018800_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.02 OrthoFinder output from all 47 species
Zm00001e023066_P001 Zm00001e023066 transcription factor (TCP). CHE circadian clock repression factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 224 313
No external refs found!