AT1G18620

Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes - 724 (source: NCBI BLink).

Gene families : OG_01_0002228 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002228_tree ,
OG_02_0001465 (LandPlants) Phylogenetic Tree(s): OG_02_0001465_tree ,
OG_03_0001921 (SeedPlants) Phylogenetic Tree(s): OG_03_0001921_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G18620
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01003137001	No alias	No description available	0.04	Archaeplastida
Gb_12665	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.05	Archaeplastida
LOC_Os07g01860.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.05	Archaeplastida
LOC_Os07g41200.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.03	Archaeplastida
LOC_Os11g37670.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_136139g0010	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.02	Archaeplastida
Solyc02g089030.1.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc02g089050.4.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.03	Archaeplastida
Solyc03g115000.3.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.05	Archaeplastida
Solyc07g008670.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e010738_P001	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	Archaeplastida
Zm00001e033505_P003	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	Archaeplastida
AMTR_s00154p00080410	evm_27.TU.AmTr_v1...	Cell cycle.cytokinesis.preprophase microtubule...	0.02	LandPlants
GSVIVT01003137001	No alias	No description available	0.02	LandPlants
Gb_12665	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	LandPlants
LOC_Os07g01860.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	LandPlants
LOC_Os07g41200.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.03	LandPlants
LOC_Os11g37670.1	No alias	no hits & (original description: none)	0.02	LandPlants
MA_136139g0010	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.02	LandPlants
Solyc02g089030.1.1	No alias	no hits & (original description: none)	0.04	LandPlants
Solyc02g089050.4.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.03	LandPlants
Solyc03g115000.3.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	LandPlants
Zm00001e010738_P001	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	LandPlants
Zm00001e033505_P003	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.02	LandPlants
Gb_12665	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.02	SeedPlants
LOC_Os07g01860.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.03	SeedPlants
MA_136139g0010	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.02	SeedPlants
Solyc02g089030.1.1	No alias	no hits & (original description: none)	0.03	SeedPlants
Solyc02g089050.4.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.03	SeedPlants
Solyc03g115000.3.1	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	SeedPlants
Zm00001e010738_P001	No alias	component TRM of TON1-TRM-PP2A (TTP) preprophase band...	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010162	seed dormancy process	RCA	Interproscan
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032795	DUF3741-assoc	270	293
IPR025486	DUF4378	780	955

External Links

No external refs found!

AT1G18620

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation