AT3G54640 (TSA1, TRP3)


Aliases : TSA1, TRP3

Description : tryptophan synthase alpha chain


Gene families : OG_01_0001710 (Gene family) Phylogenetic Tree(s): OG0001710_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G54640
Cluster HCCA cluster: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cre12.g528700 No alias 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.02 Gene family
LOC_Os03g58300 Os03g0797400 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.03 Gene family
LOC_Os07g08430 Os07g0182100 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.06 Gene family
MA_616184g0010 No alias 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.02 Gene family
Zm00001d048709 GRMZM2G085381 13.1.6.5.5 amino acid metabolism.synthesis.aromatic... 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process IDA Arabidopsis.org
BP GO:0000162 tryptophan biosynthetic process TAS Arabidopsis.org
BP GO:0000165 MAPK cascade RCA Arabidopsis.org
MF GO:0004834 tryptophan synthase activity IDA Arabidopsis.org
MF GO:0004834 tryptophan synthase activity IGI Arabidopsis.org
BP GO:0006569 tryptophan catabolic process RCA Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009595 detection of biotic stimulus RCA Arabidopsis.org
BP GO:0009627 systemic acquired resistance RCA Arabidopsis.org
BP GO:0009630 gravitropism IMP Arabidopsis.org
BP GO:0009684 indoleacetic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009697 salicylic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009735 response to cytokinin IDA Arabidopsis.org
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0016045 detection of bacterium RCA Arabidopsis.org
BP GO:0031347 regulation of defense response RCA Arabidopsis.org
BP GO:0031348 negative regulation of defense response RCA Arabidopsis.org
BP GO:0034976 response to endoplasmic reticulum stress RCA Arabidopsis.org
BP GO:0042742 defense response to bacterium IMP Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
BP GO:0043900 regulation of multi-organism process RCA Arabidopsis.org
BP GO:0050776 regulation of immune response RCA Arabidopsis.org
BP GO:0050832 defense response to fungus RCA Arabidopsis.org
BP GO:0052544 defense response by callose deposition in cell wall IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002028 Trp_synthase_suA 55 310
No external refs found!