AT3G54420 (ATEP3, EP3, CHIV, ATCHITIV)


Aliases : ATEP3, EP3, CHIV, ATCHITIV

Description : homolog of carrot EP3-3 chitinase


Gene families : OG_01_0000294 (Gene family) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G54420
Cluster HCCA cluster: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AT2G43570 CHI chitinase, putative 0.03 Gene family
AT2G43580 No alias Chitinase family protein 0.02 Gene family
AT3G47540 No alias Chitinase family protein 0.02 Gene family
GSVIVT01038111001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.07 Gene family
GSVIVT01038120001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.05 Gene family
LOC_Os04g41620 Os04g0493400 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
LOC_Os04g41640 Os04g0493600 No description available 0.02 Gene family
LOC_Os05g33150 Os05g0399700 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
MA_10435326g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
MA_741127g0010 No alias 20.1 stress.biotic Chitinase family protein 0.03 Gene family
Smo426710 PACid_15410374 No description available 0.02 Gene family
Solyc04g072000.3.1 Solyc04g072000.3 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
Zm00001d017152 GRMZM2G129189 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response RCA Arabidopsis.org
MF GO:0004568 chitinase activity ISS Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
BP GO:0006865 amino acid transport RCA Arabidopsis.org
BP GO:0009626 plant-type hypersensitive response TAS Arabidopsis.org
BP GO:0010167 response to nitrate RCA Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0010262 somatic embryogenesis IEP Arabidopsis.org
BP GO:0015706 nitrate transport RCA Arabidopsis.org
BP GO:0015824 proline transport RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 75 222
IPR000726 Glyco_hydro_19_cat 226 273
IPR001002 Chitin-bd_1 27 61
No external refs found!