AT3G54300 (VAMP727, ATVAMP727)


Aliases : VAMP727, ATVAMP727

Description : vesicle-associated membrane protein 727


Gene families : OG_01_0000485 (Gene family) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G54300
Cluster HCCA cluster: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Cre04.g225850 No alias No description available 0.02 Gene family
GSVIVT01028579001 No alias 31.4 cell.vesicle transport Encodes a member of... 0.02 Gene family
Solyc02g069160.3.1 Solyc02g069160.3 31.4 cell.vesicle transport Encodes a member of... 0.04 Gene family
Solyc11g006780.2.1 Solyc11g006780.2 No description available 0.04 Gene family
Zm00001d019091 GRMZM2G104505 31.4 cell.vesicle transport member of Synaptobrevin... 0.03 Gene family
Zm00001d034505 GRMZM2G096486 31.4 cell.vesicle transport member of Synaptobrevin... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005768 endosome IDA Arabidopsis.org
CC GO:0005768 endosome TAS Arabidopsis.org
BP GO:0006623 protein targeting to vacuole IMP Arabidopsis.org
BP GO:0006623 protein targeting to vacuole RCA Arabidopsis.org
BP GO:0007033 vacuole organization IMP Arabidopsis.org
BP GO:0007033 vacuole organization RCA Arabidopsis.org
CC GO:0016020 membrane ISS Arabidopsis.org
CC GO:0031201 SNARE complex IPI Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010908 Longin_dom 32 97
IPR001388 Synaptobrevin 148 234
No external refs found!