AT3G52440


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G52440

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g13260 Os07g0236700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os12g39990 Os12g0590700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Smo89924 PACid_15413201 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
Solyc01g096120.3.1 Solyc01g096120.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc02g065290.1.1 Solyc02g065290.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc02g078620.1.1 Solyc02g078620.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc10g009360.3.1 Solyc10g009360.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 26 79
No external refs found!