MA_86577g0010


Description : pectin methylesterase


Gene families : OG_01_0000046 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000046_tree ,
OG_02_0000020 (LandPlants) Phylogenetic Tree(s): OG_02_0000020_tree ,
OG_03_0000014 (SeedPlants) Phylogenetic Tree(s): OG_03_0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_86577g0010
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00040p00233690 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00105p00078750 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT2G47550 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G02330 ATPMEPCRB Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G20860 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.08 Archaeplastida
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_06354 No alias pectin methylesterase 0.03 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.03 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.02 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.04 Archaeplastida
Gb_24564 No alias pectin methylesterase 0.02 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10433178g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_84680g0010 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c10_1100V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Archaeplastida
Pp3c18_170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c18_22120V3.1 No alias pectin methylesterase PCR fragment F 0.02 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Smo154356 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.06 Archaeplastida
Solyc06g009180.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.08 Archaeplastida
Solyc07g064170.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g064180.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e025576_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e035838_P001 No alias pectin methylesterase 0.03 Archaeplastida
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00105p00078750 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00129p00073090 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 LandPlants
AT2G47550 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT3G05610 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT3G10710 RHS12 root hair specific 12 0.02 LandPlants
AT4G02330 ATPMEPCRB Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.07 LandPlants
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
Gb_21388 No alias pectin methylesterase 0.03 LandPlants
Gb_24564 No alias pectin methylesterase 0.02 LandPlants
LOC_Os01g13320.1 No alias pectin methylesterase 0.03 LandPlants
LOC_Os06g09340.1 No alias pectin methylesterase 0.03 LandPlants
LOC_Os09g26360.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os11g07090.1 No alias pectin methylesterase 0.02 LandPlants
MA_26888g0010 No alias no hits & (original description: none) 0.04 LandPlants
Solyc02g081990.3.1 No alias pectin methylesterase 0.02 LandPlants
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 LandPlants
Solyc06g034360.2.1 No alias pectin methylesterase 0.09 LandPlants
Solyc07g064170.3.1 No alias pectin methylesterase 0.03 LandPlants
Solyc07g064180.4.1 No alias pectin methylesterase 0.04 LandPlants
Zm00001e017514_P001 No alias pectin methylesterase 0.03 LandPlants
Zm00001e025576_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e026790_P001 No alias pectin methylesterase 0.02 LandPlants
Zm00001e035838_P001 No alias pectin methylesterase 0.02 LandPlants
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00105p00078750 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00129p00073090 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 SeedPlants
AT3G10710 RHS12 root hair specific 12 0.02 SeedPlants
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
Gb_24564 No alias pectin methylesterase 0.02 SeedPlants
Solyc02g081990.3.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc05g047590.4.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc07g064170.3.1 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e007917_P002 No alias pectin methylesterase 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 16 104
IPR000070 Pectinesterase_cat 276 449
No external refs found!