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  5. Nbi_g23706

Nbi_g23706 (ATUBC1, UBC1)


Aliases : ATUBC1, UBC1

Description : E2 ubiquitin-conjugating enzyme *(UBC1) & original description: none


Gene families : OG0000103 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g23706
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Adi_g013308 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Adi_g019867 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 39 species
Adi_g067091 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Aev_g06393 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Aev_g07023 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Als_g49014 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aop_g68442 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 39 species
Ceric.07G043600.1 ATUBC1, UBC1,... E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Dcu_g09825 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Dde_g39456 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Pir_g63354 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 39 species
Smo271478 ATUBC1, UBC1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 39 species
Spa_g14711 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 39 species
Spa_g39905 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 39 species
Tin_g05799 ATUBC1, UBC1 E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Tin_g09872 ATUBC1, UBC1 E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 39 species
Tin_g22958 ATUBC1, UBC1 E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Tin_g27007 ATUBC1, UBC1 E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 43 179
No external refs found!