AT3G51120


Description : DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding


Gene families : OG_01_0002662 (Gene family) Phylogenetic Tree(s): OG0002662_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G51120
Cluster HCCA cluster: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AT2G18090 No alias PHD finger family protein / SWIB complex BAF60b... 0.03 Gene family
GSVIVT01024181001 No alias 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.04 Gene family
LOC_Os09g36090 Os09g0530500,... 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.03 Gene family
LOC_Os10g36810 Os10g0511800,... 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.03 Gene family
Solyc02g062370.3.1 Solyc02g062370.3 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.04 Gene family
Solyc02g062375.1.1 Solyc02g062375.1 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.02 Gene family
Solyc02g084520.3.1 Solyc02g084520.3 27.3.63 RNA.regulation of transcription.PHD finger... 0.06 Gene family
Zm00001d012755 GRMZM2G350447 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.04 Gene family
Zm00001d027334 GRMZM2G436226 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.16 Gene family
Zm00001d032471 No alias 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.05 Gene family
Zm00001d043434 GRMZM2G443814 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0007346 regulation of mitotic cell cycle RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004343 Plus-3_dom 458 561
IPR000571 Znf_CCCH 1271 1292
IPR003169 GYF 719 759
IPR003121 SWIB_MDM2_domain 323 394
No external refs found!