- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00175270 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g31790... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00242080 | CRR28,... | Pentatricopeptide repeat-containing protein At1g59720,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00098p00155650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20856 | OSB4 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07774 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g24374 | MEF19 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g36191 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g24107 | LPA66 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g03227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04200 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07674 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11268 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14024 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16327 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16507 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16838 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18707 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18732 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20191 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23475 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g27463 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28684 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29297 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g68129 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68130 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene03740.t1 | Aspi01Gene03740 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009198 | No alias | not classified & original description: CDS=1-3051 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g29658 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29689 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g32896 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G024000.1 | EMB2261, Ceric.09G024000 | not classified & original description: pacid=50587738... | 0.05 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g21216 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g35622 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g16100 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g28401 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g35743 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009974001 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017989001 | LOI1, MEF11 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32439 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_33439 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os01g19380.1 | LOC_Os01g19380 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g49740.1 | EMB2744, LOC_Os05g49740 | Pentatricopeptide repeat-containing protein At5g39680... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g39650.1 | LOC_Os06g39650 | Pentatricopeptide repeat-containing protein At1g31430... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g01850.1 | LOC_Os12g01850 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g15460.1 | LOC_Os12g15460 | Pentatricopeptide repeat-containing protein At1g18485... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g18557 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18910 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05976 | OTP82 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10433543g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_123466g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_138676g0010 | EMB2261 | RNA editing factor (ECD1) | 0.02 | OrthoFinder output from all 47 species | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_953793g0020 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g04990.1 | PTAC9, OSB2 | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25177 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g26073 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g28217 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34031 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g41125 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g45895 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g02370 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g06449 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g34877 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g03089 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63739 | DOT4 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g18373 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g33756 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g05208 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g05289 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18881 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32285 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g49230 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g55201 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56208 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62508 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008533 | No alias | not classified & original description: CDS=1-2436 | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g095160.3.1 | Solyc01g095160 | Pentatricopeptide repeat-containing protein At4g37170... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g014360.3.1 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114010.3.1 | Solyc03g114010 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc04g005460.1.1 | OTP82, Solyc04g005460 | Pentatricopeptide repeat-containing protein At2g20540... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc06g048900.1.1 | Solyc06g048900 | Pentatricopeptide repeat-containing protein At2g40720... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g009220.2.1 | Solyc07g009220 | Pentatricopeptide repeat-containing protein At2g34400... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc08g076150.4.1 | Solyc08g076150 | Pentatricopeptide repeat-containing protein At1g31920... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g19054 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g05660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05998 | REME1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g17469 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17867 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17873 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g22906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g22992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23000 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g32394 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g35609 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44229 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44634 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007597_P001 | Zm00001e007597 | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014800_P001 | OTP82, Zm00001e014800 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022253_P001 | Zm00001e022253 | Pentatricopeptide repeat-containing protein At1g59720,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 329 | 354 |
| IPR002885 | Pentatricopeptide_repeat | 1438 | 1461 |
| IPR002885 | Pentatricopeptide_repeat | 963 | 992 |
| IPR002885 | Pentatricopeptide_repeat | 358 | 386 |
| IPR002885 | Pentatricopeptide_repeat | 1237 | 1259 |
| IPR002885 | Pentatricopeptide_repeat | 530 | 553 |
| IPR002885 | Pentatricopeptide_repeat | 760 | 790 |
| IPR002885 | Pentatricopeptide_repeat | 631 | 652 |
| IPR002885 | Pentatricopeptide_repeat | 932 | 956 |
| IPR002885 | Pentatricopeptide_repeat | 1136 | 1159 |
| IPR002885 | Pentatricopeptide_repeat | 657 | 704 |
| IPR002885 | Pentatricopeptide_repeat | 1365 | 1410 |
| IPR002885 | Pentatricopeptide_repeat | 1060 | 1106 |
| IPR002885 | Pentatricopeptide_repeat | 859 | 907 |
| IPR002885 | Pentatricopeptide_repeat | 454 | 501 |
| IPR002885 | Pentatricopeptide_repeat | 1263 | 1309 |
| IPR002885 | Pentatricopeptide_repeat | 1161 | 1208 |
| IPR002885 | Pentatricopeptide_repeat | 252 | 299 |
| IPR002885 | Pentatricopeptide_repeat | 555 | 600 |
| No external refs found! |