AT3G50390


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0000208 (Gene family) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G50390
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g52870 Os03g0738700 35.1 not assigned.no ontology Transducin/WD40... 0.06 Gene family
Solyc01g109120.3.1 Solyc01g109120.3 28.1 DNA.synthesis/chromatin structure Transducin/WD40... 0.03 Gene family
Solyc02g090150.1.1 Solyc02g090150.1 31.1 cell.organisation Transducin/WD40 repeat-like... 0.1 Gene family
Solyc07g025140.3.1 Solyc07g025140.3 35.1 not assigned.no ontology Transducin/WD40... 0.08 Gene family
Solyc12g088980.2.1 Solyc12g088980.2 35.1 not assigned.no ontology Transducin/WD40... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005834 heterotrimeric G-protein complex ISS Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 98 124
IPR001680 WD40_repeat 379 422
IPR001680 WD40_repeat 210 238
IPR001680 WD40_repeat 302 327
IPR001680 WD40_repeat 244 279
No external refs found!