AT3G49930


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG_01_0000035 (Gene family) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G49930
Cluster HCCA cluster: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AT2G28200 No alias C2H2-type zinc finger family protein 0.05 Gene family
GSVIVT01007927001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.06 Gene family
LOC_Os03g55540 Os03g0764100 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
LOC_Os07g39960 Os07g0588600 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
MA_602g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc07g066160.1.1 Solyc07g066160.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d051865 GRMZM2G038291,... 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!