AT1G17970


Description : RING/U-box superfamily protein


Gene families : OG_01_0000125 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000125_tree ,
OG_02_0000151 (LandPlants) Phylogenetic Tree(s): OG_02_0000151_tree ,
OG_03_0000175 (SeedPlants) Phylogenetic Tree(s): OG_03_0000175_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G17970
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00133270 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00069p00114060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os01g47740.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 Archaeplastida
LOC_Os04g10680.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
LOC_Os04g51400.2 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g48040.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
LOC_Os08g14320.1 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g087060.4.1 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g010500.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g096420.2.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
Zm00001e024685_P001 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.02 Archaeplastida
AT4G34040 No alias RING/U-box superfamily protein 0.03 LandPlants
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
LOC_Os04g51400.2 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc12g096420.2.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 LandPlants
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Gb_24355 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 SeedPlants
Solyc12g096420.2.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 SeedPlants
Zm00001e028021_P003 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 319 361
No external refs found!