AT1G17890 (GER2)

Aliases : GER2

Description : NAD(P)-binding Rossmann-fold superfamily protein

Gene families : OG_01_0006698 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006698_tree ,
OG_02_0006524 (LandPlants) Phylogenetic Tree(s): OG_02_0006524_tree ,
OG_03_0006414 (SeedPlants) Phylogenetic Tree(s): OG_03_0006414_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G17890
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
Solyc07g006070.1.1	No alias	GDP-L-fucose synthase	0.05	Archaeplastida
Solyc07g006070.1.1	No alias	GDP-L-fucose synthase	0.05	LandPlants
GSVIVT01023706001	No alias	Carbohydrate metabolism.nucleotide sugar...	0.02	SeedPlants
LOC_Os06g44270.1	No alias	GDP-L-fucose synthase	0.02	SeedPlants
Solyc07g006070.1.1	No alias	GDP-L-fucose synthase	0.05	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006857	oligopeptide transport	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	None	Extended
BP	GO:0009226	nucleotide-sugar biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042350	GDP-L-fucose biosynthetic process	ISS	Interproscan
BP	GO:0042886	amide transport	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046368	GDP-L-fucose metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001509	Epimerase_deHydtase	22	253

External Links

No external refs found!

AT1G17890 (GER2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation