MA_85955g0010


Description : transcription factor (ARF)


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0009308 (LandPlants) Phylogenetic Tree(s): OG_02_0009308_tree ,
OG_03_0012392 (SeedPlants) Phylogenetic Tree(s): OG_03_0012392_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_85955g0010
Cluster HCCA: Cluster_434

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00200760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
AT1G59750 ARF1 auxin response factor 1 0.04 Archaeplastida
GSVIVT01021553001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
LOC_Os02g06910.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os02g35140.1 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os04g56850.1 No alias transcription factor (ARF) 0.02 Archaeplastida
LOC_Os04g57610.1 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os12g41950.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Pp3c13_4720V3.1 No alias auxin response factor 6 0.02 Archaeplastida
Pp3c14_16990V3.1 No alias auxin response factor 6 0.03 Archaeplastida
Pp3c4_12970V3.1 No alias auxin response factor 16 0.02 Archaeplastida
Pp3c4_13010V3.1 No alias auxin response factor 16 0.03 Archaeplastida
Solyc03g031970.4.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e006640_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e015164_P002 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e018126_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e025163_P001 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e041910_P003 No alias transcription factor (ARF) 0.02 Archaeplastida
GSVIVT01021552001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 LandPlants
GSVIVT01035205001 No alias Auxin response factor 12 OS=Oryza sativa subsp. japonica 0.03 LandPlants
Gb_39686 No alias transcription factor (ARF) 0.03 LandPlants
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.02 LandPlants
Gb_39686 No alias transcription factor (ARF) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 117 203
No external refs found!