AT3G47820 (PUB39)


Aliases : PUB39

Description : PLANT U-BOX 39


Gene families : OG_01_0002750 (Gene family) Phylogenetic Tree(s): OG0002750_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G47820
Cluster HCCA cluster: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g13080 Os06g0238000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING PLANT... 0.02 Gene family
LOC_Os06g13090 Os06g0238200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os09g21740 Os09g0386200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo90666 PACid_15414232 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d044773 GRMZM2G406758 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 257 294
IPR000225 Armadillo 298 336
IPR003613 Ubox_domain 11 81
No external refs found!