AT3G47550


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0000245 (Gene family) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G47550
Cluster HCCA cluster: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008001001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc01g010880.3.1 Solyc01g010880.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc06g069780.3.1 Solyc06g069780.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d005765 GRMZM2G113619 No description available 0.03 Gene family
Zm00001d048908 GRMZM2G303431 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
BP GO:0006623 protein targeting to vacuole RCA Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0016192 vesicle-mediated transport RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022143 DUF3675 121 218
IPR011016 Znf_RING-CH 69 114
No external refs found!