AT3G47530


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G47530
Cluster HCCA cluster: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g20420 Os07g0299800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_211508g0010 No alias No description available 0.01 Gene family
MA_43497g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo101239 PACid_15401619 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 281 329
IPR002885 Pentatricopeptide_repeat 180 207
IPR002885 Pentatricopeptide_repeat 357 383
IPR032867 DYW_dom 456 581
No external refs found!