AT3G47480


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0000164 (Gene family) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G47480
Cluster HCCA cluster: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT3G51920 ATCML9, CAM9, CML9 calmodulin 9 0.03 Gene family
GSVIVT01018070001 No alias 30.3 signalling.calcium Encodes a calmodulin-like... 0.03 Gene family
LOC_Os12g41110 Os12g0603800 30.3 signalling.calcium Encodes a calmodulin-like... 0.03 Gene family
Smo413463 PACid_15414617 30.3 signalling.calcium encodes a calmodulin that is... 0.02 Gene family
Solyc10g081170.2.1 Solyc10g081170.2 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Arabidopsis.org
BP GO:0002237 response to molecule of bacterial origin RCA Arabidopsis.org
BP GO:0002679 respiratory burst involved in defense response RCA Arabidopsis.org
MF GO:0005509 calcium ion binding ISS Arabidopsis.org
CC GO:0005886 plasma membrane ISM Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
BP GO:0009581 detection of external stimulus RCA Arabidopsis.org
BP GO:0009595 detection of biotic stimulus RCA Arabidopsis.org
BP GO:0009627 systemic acquired resistance RCA Arabidopsis.org
BP GO:0009697 salicylic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009814 defense response, incompatible interaction RCA Arabidopsis.org
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0031348 negative regulation of defense response RCA Arabidopsis.org
BP GO:0034976 response to endoplasmic reticulum stress RCA Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
BP GO:0043069 negative regulation of programmed cell death RCA Arabidopsis.org
BP GO:0045088 regulation of innate immune response RCA Arabidopsis.org
BP GO:0050832 defense response to fungus RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 117 178
No external refs found!