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  5. AT1G17620

AT1G17620


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG_01_0000075 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000075_tree ,
OG_02_0000224 (LandPlants) Phylogenetic Tree(s): OG_02_0000224_tree ,
OG_03_0001564 (SeedPlants) Phylogenetic Tree(s): OG_03_0001564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G17620
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271600 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00001p00271680 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00030p00216100 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00101p00083450 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT5G06330 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT5G11890 No alias FUNCTIONS IN: molecular_function unknown; LOCATED IN:... 0.04 Archaeplastida
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT5G53730 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01016858001 No alias No description available 0.03 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_01957 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_01970 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_26590 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_41030 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g09880.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os01g39290.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g33550.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os02g44670.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g33990.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os04g58090.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g01220.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os09g09460.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g05860.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_180376g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_192947g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_313447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3589796g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_669170g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g02160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g19740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_2240V3.1 No alias NDR1/HIN1-like 3 0.02 Archaeplastida
Pp3c13_23080V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.04 Archaeplastida
Pp3c3_15720V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
Solyc01g007240.3.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g081450.2.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g019920.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g121620.1.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc06g074040.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g005040.4.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc10g150145.1.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g068890.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g069970.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g095980.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008171_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e014749_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e025983_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027782_P001 No alias No annotation 0.06 Archaeplastida
Zm00001e035148_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e039408_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e040847_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041974_P001 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e041977_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00101p00083450 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 LandPlants
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 LandPlants
AT5G11890 No alias FUNCTIONS IN: molecular_function unknown; LOCATED IN:... 0.04 LandPlants
GSVIVT01016858001 No alias No description available 0.02 LandPlants
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_41030 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os01g09880.1 No alias no hits & (original description: none) 0.07 LandPlants
LOC_Os01g39290.1 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 LandPlants
MA_180376g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_313447g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_669170g0020 No alias no hits & (original description: none) 0.03 LandPlants
Mp3g02160.1 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.04 LandPlants
Pp3c3_15720V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 LandPlants
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 LandPlants
Solyc03g019920.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 LandPlants
Solyc03g121620.1.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc11g069970.1.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc12g095980.2.1 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e025983_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e027782_P001 No alias No annotation 0.03 LandPlants
AMTR_s00136p00047510 evm_27.TU.AmTr_v1... No description available 0.02 SeedPlants
AT5G11890 No alias FUNCTIONS IN: molecular_function unknown; LOCATED IN:... 0.04 SeedPlants
Gb_13977 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.02 SeedPlants
Gb_41030 No alias no hits & (original description: none) 0.05 SeedPlants
LOC_Os01g09880.1 No alias no hits & (original description: none) 0.06 SeedPlants
LOC_Os01g39290.1 No alias no hits & (original description: none) 0.04 SeedPlants
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 SeedPlants
MA_10433706g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_313447g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_5350879g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_669170g0020 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc03g121620.1.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 SeedPlants
Solyc11g069970.1.1 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc12g095980.2.1 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e025983_P001 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e027782_P001 No alias No annotation 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004864 LEA_2 122 228
No external refs found!