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  5. MA_85088g0010

MA_85088g0010


Description : RING-H2-class E3 ligase


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000003 (LandPlants) Phylogenetic Tree(s): OG_02_0000003_tree ,
OG_03_0000216 (SeedPlants) Phylogenetic Tree(s): OG_03_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_85088g0010
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00002p00126990 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00007p00056710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.03 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.08 Archaeplastida
AT1G63840 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.04 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.02 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.08 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00020876.18 No alias No description available 0.01 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cre01.g009101 No alias No description available 0.02 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019585001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.05 Archaeplastida
Gb_14762 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20666 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20700 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_35557 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_35824 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.04 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g43120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g34620.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_105610g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_177673g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_181940g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_3437366g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_38690g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_611616g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_63503g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_20780V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Smo417984 No alias No description available 0.03 Archaeplastida
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc02g068415.1.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc03g114090.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g014220.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g051250.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g008080.1.1 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.04 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g081780.3.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g007530.2.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e009142_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015805_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e030136_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041391_P001 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
AMTR_s00002p00198340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT1G49210 No alias RING/U-box superfamily protein 0.05 LandPlants
AT2G27940 No alias RING/U-box superfamily protein 0.02 LandPlants
AT3G10910 No alias RING/U-box superfamily protein 0.02 LandPlants
AT3G11110 No alias RING/U-box superfamily protein 0.02 LandPlants
AT3G18773 No alias RING/U-box superfamily protein 0.03 LandPlants
AT4G15975 No alias RING/U-box superfamily protein 0.02 LandPlants
AT4G35480 RHA3B RING-H2 finger A3B 0.02 LandPlants
AT4G38140 No alias RING/U-box superfamily protein 0.08 LandPlants
AT5G05280 No alias RING/U-box superfamily protein 0.04 LandPlants
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Gb_02533 No alias RING-H2-class E3 ligase 0.03 LandPlants
Gb_14777 No alias RING-H2-class E3 ligase 0.03 LandPlants
Gb_14778 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_20666 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_23066 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
LOC_Os02g57460.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.06 LandPlants
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.03 LandPlants
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.04 LandPlants
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.05 LandPlants
MA_61738g0010 No alias no hits & (original description: none) 0.03 LandPlants
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.02 LandPlants
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.01 LandPlants
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc02g068415.1.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc04g014220.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc06g051250.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
Solyc11g005300.2.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e017960_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.05 LandPlants
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e026906_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e030136_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e034829_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e038107_P001 No alias no hits & (original description: none) 0.02 LandPlants
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
AT5G05280 No alias RING/U-box superfamily protein 0.02 SeedPlants
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.01 SeedPlants
LOC_Os11g02250.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.03 SeedPlants
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 SeedPlants
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.05 SeedPlants
Zm00001e002233_P001 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e038107_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 118 161
No external refs found!