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  5. Nbi_g22898

Nbi_g22898 (ARR1, RR1)


Aliases : ARR1, RR1

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g22898

Target Alias Description ECC score Gene Family Method Actions
Cre05.g243000 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
MA_103946g0010 RR2, ARR2 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Ppi_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 227 277
IPR001789 Sig_transdc_resp-reg_receiver 44 153
No external refs found!