AT3G28360 (PGP16)


Aliases : PGP16

Description : P-glycoprotein 16


Gene families : OG_01_0000036 (Gene family) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G28360
Cluster HCCA cluster: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AT1G10680 PGP10 P-glycoprotein 10 0.05 Gene family
AT1G27940 PGP13 P-glycoprotein 13 0.03 Gene family
GSVIVT01000580001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01013125001 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
GSVIVT01015306001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_40328g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo176522 PACid_15401958 No description available 0.04 Gene family
Smo99885 PACid_15419725 No description available 0.02 Gene family
Zm00001d043766 No alias No description available 0.02 Gene family
Zm00001d053706 GRMZM2G146034 34.16 transport.ABC transporters and multidrug... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IBA Arabidopsis.org
BP GO:0010048 vernalization response RCA Arabidopsis.org
BP GO:0010315 auxin efflux IBA Arabidopsis.org
BP GO:0010540 basipetal auxin transport IBA Arabidopsis.org
BP GO:0010541 acropetal auxin transport IBA Arabidopsis.org
CC GO:0016021 integral component of membrane IBA Arabidopsis.org
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISS Arabidopsis.org
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA Arabidopsis.org
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0048440 carpel development RCA Arabidopsis.org
BP GO:0055085 transmembrane transport IBA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 660 921
IPR011527 ABC1_TM_dom 23 290
IPR003439 ABC_transporter-like 365 513
IPR003439 ABC_transporter-like 1000 1150
No external refs found!