AT3G28345


Description : ABC transporter family protein


Gene families : OG_01_0000036 (Gene family) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G28345
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G28380 PGP17 P-glycoprotein 17 0.03 Gene family
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.04 Gene family
GSVIVT01010634001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01032578001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g18670 Os01g0290700 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os08g05690 Os08g0153000 No description available 0.01 Gene family
MA_10432922g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_180044g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
MA_18863g0010 No alias No description available 0.02 Gene family
MA_40328g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
MA_635039g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_636449g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
MA_9253g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_934204g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo92485 PACid_15418498 No description available 0.02 Gene family
Solyc02g087410.3.1 Solyc02g087410.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc03g093650.3.1 Solyc03g093650.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc05g013890.2.1 Solyc05g013890.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc11g067310.2.1 Solyc11g067310.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g098840.2.1 Solyc12g098840.2 34.16 transport.ABC transporters and multidrug... 0.06 Gene family
Zm00001d002119 GRMZM2G072850 No description available 0.02 Gene family
Zm00001d004442 GRMZM2G167658 No description available 0.02 Gene family
Zm00001d025703 GRMZM2G111462 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0010048 vernalization response RCA Arabidopsis.org
BP GO:0010315 auxin efflux IBA Arabidopsis.org
BP GO:0010540 basipetal auxin transport IBA Arabidopsis.org
BP GO:0010541 acropetal auxin transport IBA Arabidopsis.org
CC GO:0016021 integral component of membrane IBA Arabidopsis.org
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISS Arabidopsis.org
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA Arabidopsis.org
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light RCA Arabidopsis.org
BP GO:0048440 carpel development RCA Arabidopsis.org
BP GO:0055085 transmembrane transport IBA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1014 1164
IPR003439 ABC_transporter-like 379 526
IPR011527 ABC1_TM_dom 36 304
IPR011527 ABC1_TM_dom 674 942
No external refs found!