AT3G28180 (ATCSLC04, CSLC04,...)


Aliases : ATCSLC04, CSLC04, CSLC4, ATCSLC4

Description : Cellulose-synthase-like C4


Gene families : OG_01_0000116 (Gene family) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G28180
Cluster HCCA cluster: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G24630 ATCSLC8, ATCSLC08, CSLC08 Glycosyl transferase family 2 protein 0.03 Gene family
AT4G07960 ATCSLC12, CSLC12 Cellulose-synthase-like C12 0.03 Gene family
AT4G31590 ATCSLC05,... Cellulose-synthase-like C5 0.04 Gene family
GSVIVT01009290001 No alias 10.2 cell wall.cellulose synthesis encodes a gene... 0.09 Gene family
LOC_Os01g56130 Os01g0766900 10.2 cell wall.cellulose synthesis encodes a gene... 0.03 Gene family
LOC_Os05g43530 Os05g0510800 10.2 cell wall.cellulose synthesis encodes a gene... 0.02 Gene family
LOC_Os08g15420 Os08g0253800 10.2 cell wall.cellulose synthesis encodes a gene... 0.02 Gene family
LOC_Os09g25900 Os09g0428000 10.2 cell wall.cellulose synthesis encodes a gene... 0.02 Gene family
MA_10426467g0010 No alias 10.2 cell wall.cellulose synthesis encodes a beta-mannan... 0.04 Gene family
MA_10429365g0010 No alias 10.2 cell wall.cellulose synthesis encodes a gene... 0.02 Gene family
MA_9381137g0010 No alias 10.2 cell wall.cellulose synthesis encodes a gene... 0.03 Gene family
Smo230176 PACid_15411642 10.2 cell wall.cellulose synthesis encodes a beta-mannan... 0.02 Gene family
Solyc04g077470.3.1 Solyc04g077470.3 10.2 cell wall.cellulose synthesis encodes a gene... 0.05 Gene family
Solyc10g083670.2.1 Solyc10g083670.2 10.2 cell wall.cellulose synthesis encodes a beta-mannan... 0.05 Gene family
Solyc10g083675.1.1 Solyc10g083675.1 10.2 cell wall.cellulose synthesis encodes a beta-mannan... 0.04 Gene family
Solyc11g066820.2.1 Solyc11g066820.2 10.2 cell wall.cellulose synthesis encodes a beta-mannan... 0.02 Gene family
Zm00001d034205 GRMZM2G028286 10.2 cell wall.cellulose synthesis encodes a gene... 0.04 Gene family
Zm00001d038676 GRMZM2G074792 10.2 cell wall.cellulose synthesis encodes a gene... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005768 endosome IDA Arabidopsis.org
CC GO:0005794 Golgi apparatus IDA Arabidopsis.org
CC GO:0005794 Golgi apparatus ISM Arabidopsis.org
CC GO:0005802 trans-Golgi network IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
MF GO:0016757 transferase activity, transferring glycosyl groups ISS Arabidopsis.org
MF GO:0016759 cellulose synthase activity ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 293 499
No external refs found!