AT3G27340


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).


Gene families : OG_01_0000003 (Gene family) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G27340
Cluster HCCA cluster: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003966001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc07g008010.3.1 Solyc07g008010.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d041853 GRMZM2G041415 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010376 GBH-like_N 32 109
No external refs found!