Nbi_g22400


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g22400

Target Alias Description ECC score Gene Family Method Actions
AT5G40405 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g058519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099272 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23915 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50522.t1 Aspi01Gene50522 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1890.g107856 No alias not classified & original description: CDS=1-3162 0.03 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43481 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55770 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005517 CRR22 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Sam_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 220 264
IPR002885 Pentatricopeptide_repeat 420 467
IPR002885 Pentatricopeptide_repeat 121 169
IPR002885 Pentatricopeptide_repeat 319 365
IPR002885 Pentatricopeptide_repeat 293 318
IPR002885 Pentatricopeptide_repeat 495 519
No external refs found!