AT3G26744 (ATICE1, ICE1, SCRM)


Aliases : ATICE1, ICE1, SCRM

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0001615 (Gene family) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G26744
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008637001 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
LOC_Os11g32100 Os11g0523700 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Zm00001d042263 GRMZM2G173534 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Zm00001d049294 GRMZM2G033356 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003677 DNA binding TAS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009410 response to xenobiotic stimulus RCA Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy RCA Arabidopsis.org
BP GO:0009845 seed germination RCA Arabidopsis.org
BP GO:0009909 regulation of flower development RCA Arabidopsis.org
BP GO:0009933 meristem structural organization RCA Arabidopsis.org
BP GO:0010162 seed dormancy process RCA Arabidopsis.org
BP GO:0010182 sugar mediated signaling pathway RCA Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Arabidopsis.org
BP GO:0010440 stomatal lineage progression IMP Arabidopsis.org
BP GO:0016567 protein ubiquitination IDA Arabidopsis.org
BP GO:0016567 protein ubiquitination RCA Arabidopsis.org
BP GO:0016571 histone methylation RCA Arabidopsis.org
BP GO:0016579 protein deubiquitination RCA Arabidopsis.org
BP GO:0019915 lipid storage RCA Arabidopsis.org
BP GO:0043687 post-translational protein modification RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0048522 positive regulation of cellular process RCA Arabidopsis.org
BP GO:0050826 response to freezing IMP Arabidopsis.org
BP GO:0050826 response to freezing RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 310 352
No external refs found!