AT3G26610


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0001610 (Gene family) Phylogenetic Tree(s): OG0001610_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G26610
Cluster HCCA cluster: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AT1G10640 No alias Pectin lyase-like superfamily protein 0.04 Gene family
GSVIVT01032447001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Zm00001d011156 GRMZM2G338158 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
BP GO:0005975 carbohydrate metabolic process ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 100 410
No external refs found!