AT3G26610

Description : Pectin lyase-like superfamily protein

Gene families : OG_01_0001610 (Gene family) Phylogenetic Tree(s): OG0001610_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT3G26610
Cluster	HCCA cluster: Cluster_264

Target	Alias	Description	ECC score	Gene Family Method
AT1G10640	No alias	Pectin lyase-like superfamily protein	0.04	Gene family
GSVIVT01032447001	No alias	10.6.3 cell wall.degradation.pectate lyases and...	0.03	Gene family
Zm00001d011156	GRMZM2G338158	10.6.3 cell wall.degradation.pectate lyases and...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	ISS	Arabidopsis.org
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Arabidopsis.org
BP	GO:0005975	carbohydrate metabolic process	ISS	Arabidopsis.org
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	100	410

External Links

No external refs found!