AT3G26420 (ATRZ-1A)


Aliases : ATRZ-1A

Description : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain


Gene families : OG_01_0000053 (Gene family) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G26420
Cluster HCCA cluster: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.04 Gene family
GSVIVT01007865001 No alias 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.05 Gene family
GSVIVT01033666001 No alias No description available 0.03 Gene family
LOC_Os01g74340 Os01g0974701 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.06 Gene family
LOC_Os03g61990 Os03g0836200 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
LOC_Os07g08960 Os07g0187300 No description available 0.03 Gene family
MA_168323g0010 No alias No description available 0.02 Gene family
Solyc01g104840.3.1 Solyc01g104840.3 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.05 Gene family
Solyc03g071560.3.1 Solyc03g071560.3 No description available 0.04 Gene family
Solyc10g081180.2.1 Solyc10g081180.2 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.03 Gene family
Zm00001d007799 GRMZM2G082931 No description available 0.04 Gene family
Zm00001d019041 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.05 Gene family
Zm00001d033511 GRMZM2G083783 No description available 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IDA Arabidopsis.org
MF GO:0003723 RNA binding ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0009409 response to cold IMP Arabidopsis.org
BP GO:0009631 cold acclimation IGI Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 10 79
IPR001878 Znf_CCHC 120 135
No external refs found!