AT1G16800


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_01_0000652 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000652_tree ,
OG_02_0004656 (LandPlants) Phylogenetic Tree(s): OG_02_0004656_tree ,
OG_03_0005772 (SeedPlants) Phylogenetic Tree(s): OG_03_0005772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16800
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00188660 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.1 Archaeplastida
Cpa|evm.model.tig00000053.4 No alias Regulator of nonsense transcripts 1 homolog... 0.02 Archaeplastida
Cre03.g187950 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre06.g263800 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Cre07.g342450 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01009001001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01014677001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01014679001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.12 Archaeplastida
GSVIVT01029557001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 Archaeplastida
Gb_01813 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_33974 No alias helicase (SEN1) 0.06 Archaeplastida
LOC_Os09g32180.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_208026g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_88596g0010 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g10130.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g19520.1 No alias helicase (SEN1) 0.03 Archaeplastida
Pp3c10_25870V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c19_7860V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Pp3c6_5360V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Smo444379 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Solyc03g124010.3.1 No alias helicase (SEN1) 0.08 Archaeplastida
Solyc04g072830.4.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc04g072840.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e002590_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e012042_P001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
AMTR_s00025p00188660 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.07 LandPlants
GSVIVT01029557001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 LandPlants
Gb_33974 No alias helicase (SEN1) 0.05 LandPlants
LOC_Os09g32180.1 No alias no hits & (original description: none) 0.02 LandPlants
MA_208026g0010 No alias no hits & (original description: none) 0.05 LandPlants
Mp5g19520.1 No alias helicase (SEN1) 0.02 LandPlants
Smo444379 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 LandPlants
Solyc03g124010.3.1 No alias helicase (SEN1) 0.07 LandPlants
AMTR_s00025p00188660 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.06 SeedPlants
GSVIVT01029557001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 SeedPlants
Gb_33974 No alias helicase (SEN1) 0.05 SeedPlants
MA_208026g0010 No alias no hits & (original description: none) 0.05 SeedPlants
Solyc03g124010.3.1 No alias helicase (SEN1) 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0008266 poly(U) RNA binding IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!