AT3G25890


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G25890
Cluster HCCA cluster: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013914001 No alias No description available 0.03 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os09g39810 Os09g0571700 No description available 0.01 Gene family
MA_10020434g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10433094g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_329325g0010 No alias No description available 0.01 Gene family
MA_4072g0020 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
MA_490022g0010 No alias No description available 0.01 Gene family
MA_55226g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_912855g0010 No alias No description available 0.01 Gene family
MA_922309g0010 No alias No description available 0.06 Gene family
MA_938274g0010 No alias No description available 0.01 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.03 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d005309 No alias No description available 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.02 Gene family
Zm00001d034920 GRMZM2G381441 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 129 171
No external refs found!