AT3G25680


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 2454 Blast hits to 2065 proteins in 355 species: Archae - 39; Bacteria - 284; Metazoa - 1081; Fungi - 166; Plants - 264; Viruses - 45; Other Eukaryotes - 575 (source: NCBI BLink).


Gene families : OG_01_0008488 (Gene family) Phylogenetic Tree(s): OG0008488_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G25680
Cluster HCCA cluster: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g30390 Os06g0499000 35.2 not assigned.unknown 0.03 Gene family
Zm00001d045938 GRMZM2G052373 35.2 not assigned.unknown 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009536 plastid IDA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001119 SLH_dom 243 293
No external refs found!