AT3G24830


Description : Ribosomal protein L13 family protein


Gene families : OG_01_0002244 (Gene family) Phylogenetic Tree(s): OG0002244_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G24830
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.29 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.45 Gene family
Cre12.g532550 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.26 Gene family
GSVIVT01021080001 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.17 Gene family
GSVIVT01028661001 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.12 Gene family
LOC_Os03g54890 Os03g0756000 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.36 Gene family
LOC_Os07g01870 Os07g0109500 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.31 Gene family
MA_186340g0010 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.1 Gene family
Smo166650 PACid_15417896 No description available 0.21 Gene family
Solyc05g053680.2.1 Solyc05g053680.2 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.38 Gene family
Solyc09g091740.3.1 Solyc09g091740.3 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.47 Gene family
Solyc12g098330.2.1 Solyc12g098330.2 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.3 Gene family
Zm00001d013252 GRMZM2G072315 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.46 Gene family
Zm00001d034059 GRMZM2G090422 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.43 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0009664 plant-type cell wall organization RCA Arabidopsis.org
CC GO:0015934 large ribosomal subunit ISS Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
BP GO:0042545 cell wall modification RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 12 118
No external refs found!