Nbi_g22148


Description : not classified & original description: none


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g22148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253880 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00030p00244080 evm_27.TU.AmTr_v1... Tropinone reductase-like 1 OS=Erythroxylum coca 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00244570 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
AT1G52340 SRE1, SIS4,... NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G47130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.02 OrthoFinder output from all 47 species
Adi_g081832 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g106934 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g37539 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g22074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54448.t1 Aspi01Gene54448 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G054600.1 Ceric.17G054600 not classified & original description: pacid=50617944... 0.03 OrthoFinder output from all 47 species
Ceric.17G061200.1 Ceric.17G061200 not classified & original description: pacid=50617800... 0.03 OrthoFinder output from all 47 species
Dac_g07412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.04 OrthoFinder output from all 47 species
GSVIVT01036069001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
GSVIVT01036070001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_07847 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_13572 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_13608 No alias xanthoxin oxidase (ABA2) 0.03 OrthoFinder output from all 47 species
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_30465 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_30885 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32338 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_32339 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35797 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61740.1 LOC_Os03g61740 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g10000.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os04g10010.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os04g33240.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46830.1 LOC_Os07g46830 Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46860.1 LOC_Os07g46860 Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os07g46910.1 LOC_Os07g46910 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46920.1 LOC_Os07g46920 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46970.1 LOC_Os07g46970 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46980.1 LOC_Os07g46980 Secoisolariciresinol dehydrogenase (Fragment)... 0.06 OrthoFinder output from all 47 species
Len_g38241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g39462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g42773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10120560g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10435071g0010 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_308546g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_656745g0010 No alias Tropinone reductase-like 1 OS=Erythroxylum coca... 0.04 OrthoFinder output from all 47 species
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g17390.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Mp3g19140.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g24700.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.06 OrthoFinder output from all 47 species
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.02 OrthoFinder output from all 47 species
Msp_g28863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026192 No alias not classified & original description: CDS=60-1013 0.03 OrthoFinder output from all 47 species
Smo415138 No alias Sex determination protein tasselseed-2 OS=Zea mays 0.04 OrthoFinder output from all 47 species
Solyc01g005500.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc04g071960.3.1 SRE1, SIS4,... xanthoxin oxidase (ABA2) 0.03 OrthoFinder output from all 47 species
Solyc11g018600.1.1 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g056600.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Solyc12g056610.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc12g056710.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Zm00001e008253_P002 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e035437_P002 Zm00001e035437 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!