AT3G23830 (GR-RBP4, GRP4)


Aliases : GR-RBP4, GRP4

Description : glycine-rich RNA-binding protein 4


Gene families : OG_01_0000053 (Gene family) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G23830
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre09.g392350 No alias 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.01 Gene family
GSVIVT01014553001 No alias 27.4 RNA.RNA binding RNA-binding (RRM/RBD/RNP motifs)... 0.04 Gene family
GSVIVT01021024001 No alias 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.06 Gene family
LOC_Os03g17060 Os03g0278800 No description available 0.01 Gene family
MA_10430060g0020 No alias No description available 0.01 Gene family
MA_10435321g0010 No alias 27.4 RNA.RNA binding Encodes a small glycine-rich RNA... 0.01 Gene family
MA_10436424g0010 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
MA_393523g0010 No alias No description available 0.02 Gene family
MA_557110g0010 No alias 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.02 Gene family
Smo140819 PACid_15409716 No description available 0.11 Gene family
Smo406315 PACid_15415256 No description available 0.08 Gene family
Solyc01g104840.3.1 Solyc01g104840.3 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.09 Gene family
Solyc02g088790.3.1 Solyc02g088790.3 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.04 Gene family
Solyc10g081180.2.1 Solyc10g081180.2 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.02 Gene family
Solyc10g084630.2.1 Solyc10g084630.2 No description available 0.02 Gene family
Zm00001d012052 GRMZM2G042118,... 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.28 Gene family
Zm00001d019041 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.02 Gene family
Zm00001d023734 GRMZM2G009448 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.02 Gene family
Zm00001d024675 GRMZM2G003897 27.4 RNA.RNA binding RNA-binding (RRM/RBD/RNP motifs)... 0.09 Gene family
Zm00001d041750 GRMZM2G150521,... 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IDA Arabidopsis.org
MF GO:0003697 single-stranded DNA binding IDA Arabidopsis.org
MF GO:0003723 RNA binding IDA Arabidopsis.org
MF GO:0003723 RNA binding ISS Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006970 response to osmotic stress IMP Arabidopsis.org
BP GO:0006970 response to osmotic stress IEP Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009414 response to water deprivation IEP Arabidopsis.org
BP GO:0009651 response to salt stress IMP Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
BP GO:0009664 plant-type cell wall organization RCA Arabidopsis.org
BP GO:0042545 cell wall modification RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 37 107
No external refs found!