AT3G23700


Description : Nucleic acid-binding proteins superfamily


Gene families : OG_01_0007723 (Gene family) Phylogenetic Tree(s): OG0007723_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G23700
Cluster HCCA cluster: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
Cre03.g148950 No alias 35.1.14 not assigned.no ontology.S RNA-binding... 0.02 Gene family
GSVIVT01031632001 No alias 35.1.14 not assigned.no ontology.S RNA-binding... 0.05 Gene family
LOC_Os03g62780 Os03g0844900 35.1.14 not assigned.no ontology.S RNA-binding... 0.05 Gene family
MA_37826g0010 No alias 35.1.14 not assigned.no ontology.S RNA-binding... 0.03 Gene family
Smo96268 PACid_15406263 No description available 0.05 Gene family
Solyc09g097910.3.1 Solyc09g097910.3 35.1.14 not assigned.no ontology.S RNA-binding... 0.06 Gene family
Zm00001d034828 GRMZM2G016084 35.1.14 not assigned.no ontology.S RNA-binding... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
BP GO:0006098 pentose-phosphate shunt RCA Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009409 response to cold RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009773 photosynthetic electron transport in photosystem I RCA Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process RCA Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0034660 ncRNA metabolic process RCA Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003029 S1_domain 193 270
IPR003029 S1_domain 105 180
No external refs found!