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Aliases : NFD4, HMGB4, NFD04
Description : DNA bending architectural protein *(HMG-B) & original description: none
Gene families : OG0003293 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003293_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g22023 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g03324 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 39 species | |
| Als_g06156 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 39 species | |
| Als_g13137 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.07 | OrthoFinder output from all 39 species | |
| Aop_g23124 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.2 | OrthoFinder output from all 39 species | |
| Aspi01Gene15766.t1 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 39 species | |
| Aspi01Gene15766.t2 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 39 species | |
| Ceric.38G024600.1 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 39 species | |
| Dac_g44453 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.06 | OrthoFinder output from all 39 species | |
| Len_g21317 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.05 | OrthoFinder output from all 39 species | |
| Len_g27367 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 39 species | |
| Tin_g32024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 39 species | |
| Tin_g45467 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.15 | OrthoFinder output from all 39 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000775 | chromosome, centromeric region | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0007059 | chromosome segregation | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0022414 | reproductive process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098687 | chromosomal region | IEP | HCCA |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903046 | meiotic cell cycle process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009071 | HMG_box_dom | 39 | 108 |
| No external refs found! |