AT3G23230

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT3G23230
Cluster	HCCA cluster: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Gene family
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT2G46310	CRF5	cytokinin response factor 5	0.02	Gene family
AT2G47520	HRE2	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT4G32800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Gene family
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G61600	ERF104	ethylene response factor 104	0.03	Gene family
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
Cre08.g364400	No alias	No description available	0.02	Gene family
GSVIVT01001089001	No alias	No description available	0.03	Gene family
GSVIVT01013917001	No alias	No description available	0.02	Gene family
GSVIVT01013918001	No alias	No description available	0.02	Gene family
GSVIVT01013923001	No alias	No description available	0.02	Gene family
GSVIVT01013924001	No alias	No description available	0.02	Gene family
GSVIVT01013931001	No alias	No description available	0.03	Gene family
GSVIVT01013934001	No alias	No description available	0.02	Gene family
GSVIVT01013935001	No alias	No description available	0.02	Gene family
GSVIVT01018270001	No alias	No description available	0.07	Gene family
GSVIVT01018271001	No alias	No description available	0.06	Gene family
GSVIVT01018272001	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
GSVIVT01021146001	No alias	No description available	0.03	Gene family
GSVIVT01022277001	No alias	No description available	0.02	Gene family
GSVIVT01028314001	No alias	No description available	0.05	Gene family
GSVIVT01032983001	No alias	No description available	0.05	Gene family
GSVIVT01034563001	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
GSVIVT01035502001	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
GSVIVT01036201001	No alias	No description available	0.03	Gene family
GSVIVT01036388001	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os01g54890	Os01g0752500	No description available	0.04	Gene family
LOC_Os02g06330	No alias	No description available	0.02	Gene family
LOC_Os02g43790	Os02g0654700	No description available	0.03	Gene family
LOC_Os02g43970	Os02g0657000	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os02g52670	Os02g0764700	No description available	0.04	Gene family
LOC_Os02g54050	Os02g0781300	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os03g05590	Os03g0150200	No description available	0.02	Gene family
LOC_Os03g08470	Os03g0183000	No description available	0.04	Gene family
LOC_Os04g32620	Os04g0398000	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os04g46220	Os04g0546800	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
LOC_Os04g52090	Os04g0610400	No description available	0.03	Gene family
LOC_Os05g25260	Os05g0316800	No description available	0.02	Gene family
LOC_Os05g41780	Os05g0497300	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
LOC_Os06g10780	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os06g11940	Os06g0223100	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os06g47590	Os06g0691100	No description available	0.02	Gene family
LOC_Os08g36920	Os08g0474000	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
LOC_Os09g11480	Os09g0287000	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os09g13940	Os09g0309700	No description available	0.02	Gene family
LOC_Os10g25170	Os10g0390800	No description available	0.03	Gene family
LOC_Os10g41330	Os10g0562900	No description available	0.02	Gene family
MA_10430769g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
MA_15251g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
MA_214063g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
MA_225124g0010	No alias	No description available	0.02	Gene family
MA_2407076g0010	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
MA_27309g0010	No alias	No description available	0.02	Gene family
MA_3405g0010	No alias	No description available	0.02	Gene family
MA_4182g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
MA_42369g0010	No alias	No description available	0.02	Gene family
MA_66742g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
MA_8984558g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
MA_97319g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Solyc02g077370.1.1	Solyc02g077370.1	No description available	0.02	Gene family
Solyc02g090770.1.1	Solyc02g090770.1	No description available	0.02	Gene family
Solyc02g090800.1.1	Solyc02g090800.1	No description available	0.03	Gene family
Solyc02g093130.2.1	Solyc02g093130.2	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Solyc03g005500.1.1	Solyc03g005500.1	No description available	0.04	Gene family
Solyc03g005510.2.1	Solyc03g005510.2	No description available	0.04	Gene family
Solyc03g005520.1.1	Solyc03g005520.1	No description available	0.04	Gene family
Solyc03g093550.1.1	Solyc03g093550.1	No description available	0.02	Gene family
Solyc03g093560.1.1	Solyc03g093560.1	No description available	0.03	Gene family
Solyc04g012050.3.1	Solyc04g012050.3	No description available	0.03	Gene family
Solyc04g071770.3.1	Solyc04g071770.3	No description available	0.05	Gene family
Solyc05g052030.1.1	Solyc05g052030.1	No description available	0.03	Gene family
Solyc06g054630.2.1	Solyc06g054630.2	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Solyc06g063070.3.1	Solyc06g063070.3	No description available	0.04	Gene family
Solyc06g068830.2.1	Solyc06g068830.2	No description available	0.02	Gene family
Solyc06g082590.1.1	Solyc06g082590.1	No description available	0.04	Gene family
Solyc07g053740.1.1	Solyc07g053740.1	No description available	0.04	Gene family
Solyc08g078170.1.1	Solyc08g078170.1	No description available	0.03	Gene family
Solyc08g078180.1.1	Solyc08g078180.1	No description available	0.06	Gene family
Solyc08g078190.1.1	Solyc08g078190.1	No description available	0.02	Gene family
Solyc09g089910.1.1	Solyc09g089910.1	No description available	0.06	Gene family
Solyc09g089930.2.1	Solyc09g089930.2	No description available	0.06	Gene family
Solyc10g009110.1.1	Solyc10g009110.1	No description available	0.03	Gene family
Solyc10g050970.1.1	Solyc10g050970.1	No description available	0.02	Gene family
Solyc11g042580.1.1	Solyc11g042580.1	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Solyc12g013660.2.1	Solyc12g013660.2	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.05	Gene family
Zm00001d000339	GRMZM2G174347	No description available	0.03	Gene family
Zm00001d001907	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
Zm00001d002364	GRMZM2G068967	No description available	0.03	Gene family
Zm00001d002762	GRMZM2G055180	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d005309	No alias	No description available	0.02	Gene family
Zm00001d008968	GRMZM2G044077	No description available	0.02	Gene family
Zm00001d012585	GRMZM2G132185	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d014113	GRMZM2G024871	17.5.3 hormone...	0.02	Gene family
Zm00001d017462	GRMZM2G466044	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d019734	GRMZM2G123119	No description available	0.03	Gene family
Zm00001d022461	GRMZM2G025062	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Zm00001d026182	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.04	Gene family
Zm00001d026191	GRMZM2G080516	No description available	0.02	Gene family
Zm00001d026271	GRMZM2G438202	No description available	0.02	Gene family
Zm00001d031796	GRMZM2G369472	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d032295	GRMZM2G061487	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Zm00001d034920	GRMZM2G381441	17.5.2 hormone metabolism.ethylene.signal transduction...	0.04	Gene family
Zm00001d036298	GRMZM2G119865	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d036536	GRMZM2G175543	No description available	0.02	Gene family
Zm00001d038216	GRMZM2G481668	No description available	0.04	Gene family
Zm00001d039077	GRMZM5G846057	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d042717	GRMZM2G149756	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d043491	GRMZM2G474326	No description available	0.04	Gene family
Zm00001d044950	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Zm00001d046292	GRMZM2G073047	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d049364	GRMZM2G089995	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d051239	GRMZM2G300924	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d052026	GRMZM2G111415	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d052152	GRMZM2G011110	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d053859	GRMZM2G052720	No description available	0.03	Gene family

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Arabidopsis.org
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Arabidopsis.org
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Arabidopsis.org
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Arabidopsis.org
CC	GO:0005634	nucleus	ISM	Arabidopsis.org
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Arabidopsis.org
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009873	ethylene-activated signaling pathway	RCA	Arabidopsis.org
BP	GO:0009873	ethylene-activated signaling pathway	TAS	Arabidopsis.org
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEP	Arabidopsis.org
BP	GO:0010200	response to chitin	RCA	Arabidopsis.org
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	19	70

External Links

No external refs found!

AT3G23230

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation