Nbi_g21991

Description : component *(eL42) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000912 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000912_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g21991
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
Adi_g111436	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Als_g31556	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Aob_g18820	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 39 species
Aob_g18821	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Aob_g18822	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Aob_g39113	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 39 species
Aob_g41489	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Aop_g61898	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cba_g62949	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Cba_g69678	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cba_g70882	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Cba_g76091	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 39 species
Dac_g19864	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Dac_g43370	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Dcu_g43866	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Dcu_g44918	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 39 species
Dde_g36132	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Dde_g41234	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Ehy_g15570	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Ehy_g15571	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Ehy_g27767	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Lfl_g18146	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Nbi_g33489	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Nbi_g37582	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Pir_g59034	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Ppi_g10861	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 39 species
Ppi_g32853	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Ppi_g32854	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Spa_g37865	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000552	Ribosomal_L44e	19	94

External Links

No external refs found!

Nbi_g21991

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation