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  5. Nbi_g21966

Nbi_g21966


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21966

Target Alias Description ECC score Gene Family Method Actions
Aob_g08956 SCRM2, ICE2 transcriptional regulator *(DYT1/AMS) & original... 0.03 OrthoFinder output from all 47 species
Cba_g27911 AMS bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431811g0010 AMS transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_89559g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g19168 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14150 ATBHLH029,... bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 250 291
No external refs found!