AT3G22490


Description : Seed maturation protein


Gene families : OG_01_0001924 (Gene family) Phylogenetic Tree(s): OG0001924_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G22490
Cluster HCCA cluster: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001170001 No alias 33.2 development.late embryogenesis abundant Seed... 0.12 Gene family
GSVIVT01017985001 No alias 33.2 development.late embryogenesis abundant Seed... 0.2 Gene family
GSVIVT01021881001 No alias 33.2 development.late embryogenesis abundant Seed... 0.2 Gene family
LOC_Os03g06360 Os03g0159600 33.2 development.late embryogenesis abundant Seed... 0.11 Gene family
LOC_Os03g53610 Os03g0747400 33.2 development.late embryogenesis abundant late... 0.11 Gene family
LOC_Os06g23350 Os06g0341300 33.2 development.late embryogenesis abundant Seed... 0.12 Gene family
MA_10427927g0010 No alias 33.2 development.late embryogenesis abundant Seed... 0.02 Gene family
MA_1400g0010 No alias 33.2 development.late embryogenesis abundant Seed... 0.04 Gene family
Solyc09g065360.3.1 Solyc09g065360.3 33.2 development.late embryogenesis abundant Seed... 0.1 Gene family
Solyc09g082100.3.1 Solyc09g082100.3 33.2 development.late embryogenesis abundant Seed... 0.16 Gene family
Zm00001d013169 GRMZM2G091535 33.2 development.late embryogenesis abundant Seed... 0.02 Gene family
Zm00001d027740 GRMZM2G472236 33.2 development.late embryogenesis abundant Seed... 0.11 Gene family
Zm00001d034002 GRMZM2G025857 33.2 development.late embryogenesis abundant Seed... 0.15 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007011 SMP 136 192
IPR007011 SMP 14 68
IPR007011 SMP 201 260
No external refs found!